C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAN, member RAS oncogene family pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413691 RANP6-001 ENSG00000213370 9606 - 4:173633728-173634371 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungMuscleENST00000413691
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Muscle
ENST00000413691 0.020±0.00 0.042±0.00 0.041±0.00 0.038±0.00 0.019±0.00 0.036±0.00 0.018±0.00 0.036±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VG CIL_0008VG_0001 VISTA 4:173198350-173802625
CIL_0008BZ CIL_0008BZ_0001 VISTA 4:173215162-173815719
CIL_00080O CIL_00080O_0001 VISTA 4:173380161-173984834
CIL_00007S CIL_00007S_0002 CGP 4:173524969-174284264

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111343 Ran-002 protein_coding Mus_musculus 0 658
ENSMUST00000031383 Ran-001 protein_coding Mus_musculus 0 658
ENSMUST00000147835 Rasl2-9-001 protein_coding Mus_musculus 0 608
ENSMUST00000120980 Gm13461-001 processed_pseudogene Mus_musculus 0 592

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