C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bladder cancer associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414080 BLCAP-006 ENSG00000166619 9606 - 20:37518989-37527878 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Y4 CIL_0006Y4_0001 CGP 20:37344685-37527931

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088494 Blcap-002 protein_coding Mus_musculus 0 586
ENSMUST00000109528 Blcap-001 protein_coding Mus_musculus 0 586
ENSMUST00000173378 Blcap-005 protein_coding Mus_musculus 0 370
ENSMUST00000182781 Gm3852-001 processed_pseudogene Mus_musculus 0 294
ENSDART00000073847 blcap-001 protein_coding Danio_rerio 0 217
ENSMUST00000134239 Blcap-004 processed_transcript Mus_musculus 0 215
ENSMUST00000152605 Nnat-003 retained_intron Mus_musculus 5e-34 148
ENSMUST00000173839 Nnat-006 protein_coding Mus_musculus 2e-27 126
ENSMUST00000109526 Nnat-001 protein_coding Mus_musculus 2e-27 126
ENSMUST00000173595 Nnat-007 protein_coding Mus_musculus 2e-27 126
ENSMUST00000153739 Nnat-002 protein_coding Mus_musculus 2e-27 126
ENSMUST00000172487 Nnat-008 protein_coding Mus_musculus 8e-27 124
ENSMUST00000088484 Nnat-005 protein_coding Mus_musculus 3e-26 122
ENSMUST00000173793 Nnat-010 protein_coding Mus_musculus 3e-26 122
ENSMUST00000173041 Nnat-009 protein_coding Mus_musculus 3e-26 122

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