C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 26
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414423 WDR26-001 ENSG00000162923 9606 - 1:224385143-224434299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000414423
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000414423 12.771±0.00 10.265±0.00 3.744±0.00 7.392±3.29 13.675±0.00 5.951±2.20 5.328±2.28 7.025±0.00 3.471±0.83 10.533±0.00 9.560±0.00 5.638±2.74 1.575±0.45 6.141±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IP CIL_0008IP_0001 VISTA 1:224201914-224806293
CIL_0000C0 CIL_0000C0_0002 CGP 1:224356850-224437033
CIL_0005S2 CIL_0005S2_0001 CGP 1:224385143-224740549

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162819 Wdr26-001 protein_coding Mus_musculus 0 4209
ENSMUST00000036329 Wdr26-003 nonsense_mediated_decay Mus_musculus 0 3565
ENSMUST00000162963 Wdr26-002 protein_coding Mus_musculus 0 3522
ENSMUST00000159673 Wdr26-007 nonsense_mediated_decay Mus_musculus 0 647
ENSDART00000029894 wdr26b-001 protein_coding Danio_rerio 0 630
ENSMUST00000159290 Wdr26-008 protein_coding Mus_musculus 0 521
ENSMUST00000159698 Wdr26-006 processed_transcript Mus_musculus 0 451
ENSMUST00000159625 Wdr26-005 retained_intron Mus_musculus 0 427
ENSMUST00000161531 Wdr26-004 retained_intron Mus_musculus 0 309

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