C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glutamate decarboxylase 1 (brain, 67kDa)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414527 GAD1-013 ENSG00000128683 9606 + 2:170817038-170859916 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungENST00000414527
Transcript ID Bladder Lung
ENST00000414527 0.788±0.00 0.112±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SB CIL_0003SB_0002 CGP 2:170783786-170861151
CIL_0003SC CIL_0003SC_0002 CGP 2:170813213-170967129

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016831 IEA carboxy-lyase activity
GO:0019752 IEA carboxylic acid metabolic process
GO:0030170 IEA pyridoxal phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140478 Gad1-006 processed_transcript Mus_musculus 0 1465
ENSMUST00000094934 Gad1-001 protein_coding Mus_musculus 0 1465
ENSMUST00000167243 Gad1-ps-201 protein_coding Mus_musculus 0 1375
ENSMUST00000130604 Gad1-002 nonsense_mediated_decay Mus_musculus 0 856
ENSMUST00000123330 Gad1-008 protein_coding Mus_musculus 0 850
ENSMUST00000130998 Gad1-004 protein_coding Mus_musculus 0 850
ENSMUST00000148210 Gad1-003 protein_coding Mus_musculus 0 850
ENSMUST00000155979 Gad1-005 retained_intron Mus_musculus 0 739

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