C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurobeachin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414576 NBEAL1-009 ENSG00000144426 9606 + 2:203167310-203217464 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaTestisENST00000414576
Transcript ID Muscle Ovary Placenta Testis
ENST00000414576 0.199±0.00 0.699±0.00 0.369±0.19 1.515±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020V CIL_00020V_0001 CGP 2:202912214-203226378
CIL_0001QW CIL_0001QW_0001 CGP 2:203014879-203305840

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162291 Nbeal1-002 nonsense_mediated_decay Mus_musculus 0 2488
ENSMUST00000160834 Nbeal1-001 protein_coding Mus_musculus 0 2488
ENSMUST00000159344 Nbeal1-004 protein_coding Mus_musculus 0 937
ENSMUST00000035569 Nbeal1-010 protein_coding Mus_musculus 0 928
ENSMUST00000188450 Nbeal1-005 retained_intron Mus_musculus 0 202
ENSMUST00000190958 Nbeal1-009 retained_intron Mus_musculus 3.00004e-41 174

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