Transcript ID | Bladder | Colon | Muscle |
---|---|---|---|
ENST00000415537 | 13.837±0.00 | 40.970±0.00 | 23.783±0.00 |
Transcript Info |
||||||
Description: | major histocompatibility complex, class I, C | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000415537 | HLA-C-007 | ENSG00000204525 | 9606 | - | 6:31270214-31272069 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_000420 | CIL_000420_0001 | CGP | 6:31268749-31357188 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0006955 | IEA | immune response |
GO:0019882 | IEA | antigen processing and presentation |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000172785 | H2-D1-001 | protein_coding | Mus_musculus | 0 | 527 |
ENSMUST00000097335 | Gm8909-201 | protein_coding | Mus_musculus | 0 | 516 |
ENSMUST00000040467 | Gm8909-001 | protein_coding | Mus_musculus | 0 | 516 |
ENSMUST00000173353 | Gm8909-002 | protein_coding | Mus_musculus | 0 | 516 |
ENSMUST00000025181 | H2-K1-001 | protein_coding | Mus_musculus | 0 | 510 |
ENSMUST00000114311 | H2-K1-002 | retained_intron | Mus_musculus | 0 | 510 |
ENSMUST00000172912 | H2-K1-003 | protein_coding | Mus_musculus | 0 | 510 |
ENSMUST00000173075 | H2-K1-010 | protein_coding | Mus_musculus | 0 | 505 |
ENSMUST00000068291 | H2-Q10-201 | protein_coding | Mus_musculus | 0 | 503 |
ENSMUST00000174525 | H2-Q10-001 | protein_coding | Mus_musculus | 0 | 503 |
ENSMUST00000076256 | H2-Q7-201 | protein_coding | Mus_musculus | 0 | 490 |
ENSMUST00000078205 | H2-Q7-202 | protein_coding | Mus_musculus | 0 | 490 |
ENSMUST00000071951 | H2-Q7-001 | protein_coding | Mus_musculus | 0 | 490 |
ENSMUST00000081435 | H2-Q4-001 | protein_coding | Mus_musculus | 0 | 473 |
ENSMUST00000174250 | H2-K2-001 | unprocessed_pseudogene | Mus_musculus | 0 | 457 |
ENSMUST00000113879 | H2-Q6-201 | protein_coding | Mus_musculus | 0 | 457 |
ENSMUST00000174699 | H2-Q6-001 | protein_coding | Mus_musculus | 0 | 457 |
ENSMUST00000172979 | H2-Q5-001 | polymorphic_pseudogene | Mus_musculus | 0 | 455 |
ENSMUST00000116598 | H2-Q7-203 | protein_coding | Mus_musculus | 0 | 453 |
ENSMUST00000173788 | H2-Q7-003 | retained_intron | Mus_musculus | 0 | 453 |
ENSMUST00000074806 | H2-Q2-001 | protein_coding | Mus_musculus | 0 | 422 |
ENSMUST00000174854 | H2-Q5-002 | retained_intron | Mus_musculus | 0 | 412 |
ENSMUST00000073208 | H2-Q1-001 | protein_coding | Mus_musculus | 0 | 411 |
ENSMUST00000105041 | H2-Q1-002 | protein_coding | Mus_musculus | 0 | 411 |
ENSMUST00000174094 | Gm10499-002 | transcribed_unprocessed_pseudogene | Mus_musculus | 0 | 401 |
ENSMUST00000173080 | H2-Bl-201 | protein_coding | Mus_musculus | 0 | 399 |
ENSMUST00000172538 | C920025E04Rik-001 | unprocessed_pseudogene | Mus_musculus | 0 | 387 |
ENSMUST00000102678 | H2-T23-001 | protein_coding | Mus_musculus | 0 | 387 |
ENSMUST00000184502 | H2-Bl-008 | protein_coding | Mus_musculus | 0 | 370 |
ENSMUST00000174839 | H2-T23-002 | retained_intron | Mus_musculus | 0 | 357 |
ENSMUST00000174589 | H2-Q10-002 | retained_intron | Mus_musculus | 0 | 259 |
ENSMUST00000172994 | H2-Q1-003 | retained_intron | Mus_musculus | 0 | 243 |
ENSMUST00000173975 | H2-Q4-002 | retained_intron | Mus_musculus | 0 | 241 |
ENSMUST00000174778 | Gm10499-001 | retained_intron | Mus_musculus | 0 | 224 |
ENSMUST00000174471 | H2-T23-005 | retained_intron | Mus_musculus | 0 | 204 |
ENSMUST00000174161 | H2-T23-003 | retained_intron | Mus_musculus | 0 | 204 |
ENSMUST00000172782 | H2-K1-007 | processed_transcript | Mus_musculus | 8.00141e-43 | 178 |
ENSMUST00000166442 | H2-T10-201 | protein_coding | Mus_musculus | 3e-32 | 143 |
ENSMUST00000174382 | H2-T10-003 | polymorphic_pseudogene | Mus_musculus | 3e-32 | 143 |
ENSMUST00000174625 | H2-T10-004 | retained_intron | Mus_musculus | 3e-32 | 143 |
ENSMUST00000077960 | H2-T22-002 | protein_coding | Mus_musculus | 1e-30 | 137 |
ENSMUST00000080015 | H2-T22-001 | protein_coding | Mus_musculus | 1e-30 | 137 |
ENSMUST00000173280 | H2-T22-005 | nonsense_mediated_decay | Mus_musculus | 1e-30 | 137 |
ENSMUST00000058801 | H2-T22-003 | protein_coding | Mus_musculus | 1e-30 | 137 |
ENSMUST00000172633 | H2-T22-004 | retained_intron | Mus_musculus | 1e-30 | 137 |
ENSMUST00000185087 | H2-Bl-005 | nonsense_mediated_decay | Mus_musculus | 2e-29 | 134 |
ENSMUST00000113742 | Gm11127-001 | protein_coding | Mus_musculus | 6e-29 | 132 |
ENSMUST00000046131 | Gm7030-201 | protein_coding | Mus_musculus | 3e-27 | 126 |
ENSMUST00000172968 | Gm7030-202 | protein_coding | Mus_musculus | 3e-27 | 126 |
ENSMUST00000173322 | Gm7030-001 | protein_coding | Mus_musculus | 3e-27 | 126 |
ENSMUST00000038580 | H2-M3-001 | protein_coding | Mus_musculus | 3e-27 | 126 |
ENSMUST00000073546 | H2-M10.3-001 | protein_coding | Mus_musculus | 1e-26 | 124 |
ENSMUST00000095300 | H2-T3-003 | nonsense_mediated_decay | Mus_musculus | 1e-25 | 121 |
ENSMUST00000174101 | H2-T3-002 | nonsense_mediated_decay | Mus_musculus | 1e-25 | 121 |
ENSMUST00000172663 | H2-T3-008 | nonsense_mediated_decay | Mus_musculus | 1e-25 | 121 |
ENSMUST00000173629 | H2-T3-009 | nonsense_mediated_decay | Mus_musculus | 1e-25 | 121 |
ENSMUST00000173435 | H2-T3-007 | retained_intron | Mus_musculus | 1e-25 | 121 |
ENSMUST00000173133 | H2-T3-006 | nonsense_mediated_decay | Mus_musculus | 1e-25 | 121 |
ENSMUST00000173577 | H2-T3-004 | retained_intron | Mus_musculus | 1e-25 | 121 |
ENSMUST00000102675 | H2-T3-001 | protein_coding | Mus_musculus | 1e-25 | 121 |
ENSMUST00000025312 | H2-T3-005 | protein_coding | Mus_musculus | 1e-25 | 121 |
ENSMUST00000173127 | Gm9574-001 | unprocessed_pseudogene | Mus_musculus | 6e-24 | 115 |
ENSMUST00000023845 | H2-M10.2-001 | protein_coding | Mus_musculus | 6e-24 | 115 |
ENSMUST00000041531 | H2-M10.5-001 | protein_coding | Mus_musculus | 6e-24 | 115 |
ENSMUST00000169950 | H2-M10.4-201 | protein_coding | Mus_musculus | 2e-23 | 113 |
ENSMUST00000057502 | H2-M10.4-001 | protein_coding | Mus_musculus | 2e-23 | 113 |
ENSMUST00000113760 | H2-T24-001 | protein_coding | Mus_musculus | 3e-22 | 110 |
ENSMUST00000174378 | Gm4256-001 | unprocessed_pseudogene | Mus_musculus | 1e-21 | 108 |
ENSMUST00000041964 | H2-M11-001 | protein_coding | Mus_musculus | 1e-21 | 108 |
ENSMUST00000041398 | H2-M10.6-001 | protein_coding | Mus_musculus | 4e-21 | 106 |
ENSMUST00000172895 | Gm8810-001 | unprocessed_pseudogene | Mus_musculus | 1e-20 | 104 |
ENSMUST00000173402 | Gm5682-001 | unprocessed_pseudogene | Mus_musculus | 2e-19 | 100 |