C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: high mobility group AT-hook 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415560 HMGA1P1-001 ENSG00000236683 9606 + X:26748029-26749090 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainKidneyLungMusclePlacentaTestisENST00000415560
Transcript ID Adipose Adrenal Brain Kidney Lung Muscle Placenta Testis
ENST00000415560 0.024±0.00 0.025±0.00 0.032±0.00 0.081±0.00 0.075±0.00 0.109±0.00 0.043±0.00 0.144±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117254 Hmga1-004 protein_coding Mus_musculus 0 425
ENSMUST00000119486 Hmga1-006 protein_coding Mus_musculus 0 425
ENSMUST00000117600 Hmga1-001 protein_coding Mus_musculus 0 425
ENSMUST00000105046 Hmga1-rs1-001 protein_coding Mus_musculus 0 425
ENSMUST00000118599 Hmga1-005 protein_coding Mus_musculus 0 405
ENSMUST00000118570 Hmga1-003 protein_coding Mus_musculus 0 261
ENSMUST00000114888 Hmga1-002 protein_coding Mus_musculus 0 261

Loading