C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H2A histone family, member Z pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416034 H2AFZP1-001 ENSG00000213440 9606 - 21:44046347-44047041 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverLungOvaryENST00000416034
Transcript ID Adipose Brain Breast Colon Liver Lung Ovary
ENST00000416034 0.049±0.00 0.056±0.00 0.054±0.00 0.148±0.00 0.188±0.00 0.050±0.00 0.115±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173192 RP23-374K9.2-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000041045 H2afz-001 protein_coding Mus_musculus 0 424
ENSMUST00000138010 H2afz-002 retained_intron Mus_musculus 0 370
ENSMUST00000173790 H2afz-007 protein_coding Mus_musculus 0 315
ENSMUST00000173666 H2afz-006 processed_transcript Mus_musculus 0 309
ENSMUST00000121866 Gm13007-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000174561 H2afz-005 protein_coding Mus_musculus 0 259
ENSMUST00000120206 Gm14687-001 processed_pseudogene Mus_musculus 1e-38 163
ENSMUST00000172696 H2afz-008 nonsense_mediated_decay Mus_musculus 3e-24 115
ENSMUST00000125821 H2afz-003 retained_intron Mus_musculus 4e-23 111

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