C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDK5 regulatory subunit associated protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416449 CDK5RAP2-008 ENSG00000136861 9606 - 9:120389198-120477354 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLiverMuscleENST00000416449
Transcript ID Adrenal Brain Colon Heart Kidney Liver Muscle
ENST00000416449 1.873±0.00 2.855±0.00 1.888±0.00 5.017±0.00 1.551±0.00 0.926±0.00 14.386±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FK CIL_0004FK_0001 CGP 9:119153458-120580170
CIL_0004FL CIL_0004FL_0001 CGP 9:120388869-120714470

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005813 IDA centrosome
GO:0030054 IDA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076541 Cdk5rap2-003 nonsense_mediated_decay Mus_musculus 0 1382
ENSMUST00000144099 Cdk5rap2-001 protein_coding Mus_musculus 0 1382
ENSMUST00000138561 Cdk5rap2-006 protein_coding Mus_musculus 0 464
ENSMUST00000140108 Cdk5rap2-002 protein_coding Mus_musculus 0 209

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