C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, beta class I pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416519 TUBBP6-001 ENSG00000235207 9606 + 7:55645620-55646951 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLungMuscleOvaryTestisENST00000416519
Transcript ID Adipose Adrenal Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000416519 0.013±0.00 0.028±0.00 0.061±0.00 0.074±0.00 0.013±0.00 0.024±0.00 0.026±0.00 0.011±0.00 0.015±0.00 0.048±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001566 Tubb5-001 protein_coding Mus_musculus 0 1415
ENSMUST00000056427 Tubb2a-201 protein_coding Mus_musculus 0 1002
ENSMUST00000075774 Tubb2b-201 protein_coding Mus_musculus 0 959
ENSMUST00000043584 Tubb4b-001 protein_coding Mus_musculus 0 924
ENSMUST00000179460 Tubb4b-ps1-201 protein_coding Mus_musculus 0 905
ENSMUST00000117711 Gm11892-001 processed_pseudogene Mus_musculus 0 896
ENSDART00000143702 zgc:123194-001 protein_coding Danio_rerio 0 881
ENSMUST00000187481 RP23-8J15.8-001 processed_pseudogene Mus_musculus 0 874
ENSDART00000055380 tubb5-201 protein_coding Danio_rerio 0 861
ENSMUST00000001513 Tubb6-201 protein_coding Mus_musculus 0 765
ENSMUST00000160140 Gm16165-001 processed_pseudogene Mus_musculus 0 451
ENSDART00000075040 tubb1-001 protein_coding Danio_rerio 0 412

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