C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sperm autoantigenic protein 17 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416656 SPA17P1-001 ENSG00000236797 9606 - 10:75382393-75382844 transcribed_processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastKidneyLiverLungOvaryPlacentaTestisENST00000416656
Transcript ID Adrenal Bladder Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000416656 0.320±0.00 0.374±0.00 0.229±0.13 0.489±0.30 0.348±0.00 0.115±0.00 0.061±0.00 0.094±0.01 0.119±0.00 0.110±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JX CIL_0007JX_0001 UCNEbase 10:74418410-76978156
CIL_0008UO CIL_0008UO_0001 VISTA 10:74941035-75542526
CIL_000925 CIL_000925_0001 VISTA 10:74961440-75563087
CIL_00084B CIL_00084B_0001 VISTA 10:75078488-75679926
CIL_0008K8 CIL_0008K8_0001 VISTA 10:75104806-75705881
CIL_0007IE CIL_0007IE_0001 CGP 10:75233969-75401906
CIL_0008KK CIL_0008KK_0001 VISTA 10:75241252-75843906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

No Homologs available.

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