C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417156 RP11-57C19.6-001 ENSG00000224797 9606 - 9:130724786-130725050 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000417156
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000417156 0.085±0.00 0.090±0.00 0.190±0.00 0.176±0.00 0.528±0.00 0.285±0.00 0.518±0.00 1.233±0.00 1.747±0.00 1.049±0.00 0.335±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000936 CIL_000936_0001 VISTA 9:130178260-130779710
CIL_0008XQ CIL_0008XQ_0001 VISTA 9:130365168-130965841
CIL_0007CW CIL_0007CW_0002 CGP 9:130693721-130887675
CIL_0006I2 CIL_0006I2_0001 CGP 9:130713946-130896812

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119948 Gm14593-001 processed_pseudogene Mus_musculus 3e-18 95
ENSMUST00000121220 Gm13862-001 processed_pseudogene Mus_musculus 1e-16 90
ENSMUST00000118727 Gm12351-001 processed_pseudogene Mus_musculus 4e-16 88
ENSMUST00000170206 Gm4468-001 processed_pseudogene Mus_musculus 0.000000000000002 86
ENSMUST00000117174 Gm14816-001 processed_pseudogene Mus_musculus 0.000000000000006 84

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