C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L3 pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417878 RPL3P7-001 ENSG00000225093 9606 - 6:108004357-108005568 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000417878
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000417878 0.358±0.00 0.490±0.00 0.126±0.02 0.628±0.00 0.507±0.00 0.029±0.00 0.305±0.00 0.030±0.00 0.221±0.00 0.156±0.00 0.120±0.09 0.169±0.00 0.330±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KA CIL_0007KA_0001 UCNEbase 6:107632412-108443377
CIL_0008G4 CIL_0008G4_0001 VISTA 6:107814126-108415302
CIL_0009BP CIL_0009BP_0001 VISTA 6:107816039-108417248

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167577 Gm7352-001 processed_pseudogene Mus_musculus 0 976
ENSMUST00000181797 Gm3466-001 processed_pseudogene Mus_musculus 0 976
ENSMUST00000178243 Gm4904-001 processed_pseudogene Mus_musculus 0 976
ENSMUST00000179745 Gm8266-001 processed_pseudogene Mus_musculus 0 976
ENSMUST00000179984 Gm2871-001 processed_pseudogene Mus_musculus 0 976
ENSMUST00000168436 Gm8323-001 processed_pseudogene Mus_musculus 0 972
ENSMUST00000165508 Gm8340-001 processed_pseudogene Mus_musculus 0 970
ENSMUST00000169120 Gm8164-001 processed_pseudogene Mus_musculus 0 970
ENSMUST00000165448 Gm8379-001 processed_pseudogene Mus_musculus 0 965
ENSMUST00000180022 Gm8305-001 processed_pseudogene Mus_musculus 0 965
ENSMUST00000181256 Gm2907-001 processed_pseudogene Mus_musculus 0 959
ENSMUST00000178248 Gm2877-001 processed_pseudogene Mus_musculus 0 959
ENSMUST00000178911 Gm8324-001 processed_pseudogene Mus_musculus 0 953
ENSMUST00000121173 Gm11765-001 processed_pseudogene Mus_musculus 0 904
ENSMUST00000164656 Gm3326-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000121389 Gm11662-001 processed_pseudogene Mus_musculus 0 848
ENSMUST00000185330 RP23-267J24.4-001 processed_pseudogene Mus_musculus 0 754

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