C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417952 PSMD2-004 ENSG00000175166 9606 + 3:184299198-184302692 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartMuscleOvaryPlacentaTestisENST00000417952
Transcript ID Adipose Brain Heart Muscle Ovary Placenta Testis
ENST00000417952 37.580±0.00 38.164±0.00 47.920±0.00 152.780±0.00 151.887±0.00 104.167±0.00 86.830±13.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G3 CIL_0005G3_0001 CGP 3:184135038-184684758
CIL_000571 CIL_000571_0001 CGP 3:184259213-184309054
CIL_000572 CIL_000572_0001 CGP 3:184298709-184335358

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007212 Psmd2-001 protein_coding Mus_musculus 0 697
ENSMUST00000050717 Gm5422-201 protein_coding Mus_musculus 0 520
ENSMUST00000172207 Psmd2-002 nonsense_mediated_decay Mus_musculus 0 494
ENSMUST00000169195 Psmd2-004 processed_transcript Mus_musculus 0 329

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