C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome c, somatic pseudogene 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417973 CYCSP10-001 ENSG00000232901 9606 - 3:10000647-10000940 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartMuscleOvaryTestisENST00000417973
Transcript ID Adipose Adrenal Brain Breast Colon Heart Muscle Ovary Testis
ENST00000417973 0.874±0.00 0.805±0.00 0.132±0.00 0.319±0.00 1.997±1.42 0.233±0.00 1.343±0.00 0.333±0.10 2.942±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CD CIL_0002CD_0001 CGP 3:9945542-10011116
CIL_0002D5 CIL_0002D5_0001 CGP 3:9962537-10101930

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073080 Gm10053-201 protein_coding Mus_musculus 0 348
ENSMUST00000077766 Cycs-002 retained_intron Mus_musculus 0 348
ENSMUST00000161401 Cycs-001 protein_coding Mus_musculus 0 348
ENSMUST00000078246 Gm10108-201 protein_coding Mus_musculus 0 342
ENSMUST00000118431 Gm13772-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000119535 Gm11625-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000119355 Gm13252-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000120216 Gm15781-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000119817 Gm11857-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000117168 Gm15714-001 processed_pseudogene Mus_musculus 0 195

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