C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 90
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418063 ZNF90-001 ENSG00000213988 9606 + 19:20078021-20119752 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000418063
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000418063 0.082±0.00 0.464±0.00 0.061±0.00 0.285±0.19 0.215±0.07 0.080±0.00 0.212±0.02 0.476±0.00 0.330±0.05 0.206±0.00 0.218±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 NAS zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 0 418
ENSMUST00000012725 Zfp273-002 protein_coding Mus_musculus 0 416
ENSMUST00000181391 Zfp273-001 protein_coding Mus_musculus 0 416
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 0 416
ENSMUST00000137496 Zfp738-001 protein_coding Mus_musculus 0 381
ENSMUST00000190566 Zfp708-002 protein_coding Mus_musculus 0 374
ENSMUST00000109742 Zfp708-001 protein_coding Mus_musculus 0 374
ENSMUST00000109743 RSLCAN18-202 protein_coding Mus_musculus 0 374
ENSMUST00000186303 RSLCAN18-001 nonsense_mediated_decay Mus_musculus 0 374
ENSMUST00000185856 RSLCAN18-004 processed_transcript Mus_musculus 0 374
ENSMUST00000091520 Zfp85-201 protein_coding Mus_musculus 0 353
ENSMUST00000144183 Zfp85-001 protein_coding Mus_musculus 0 353
ENSMUST00000180507 Zfp493-003 retained_intron Mus_musculus 0 305
ENSMUST00000164936 Zfp493-001 protein_coding Mus_musculus 0 305
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 0 287
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 0 287
ENSMUST00000181892 Zfp748-001 protein_coding Mus_musculus 0 285
ENSMUST00000112544 Gm15446-001 protein_coding Mus_musculus 0 217
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 0 211
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 0 211
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 0 211
ENSMUST00000019572 Zfp874b-001 protein_coding Mus_musculus 4.2039e-45 187
ENSMUST00000075255 Zfp874a-001 protein_coding Mus_musculus 7.00649e-43 180
ENSMUST00000180580 Zfp874a-002 nonsense_mediated_decay Mus_musculus 7.00649e-43 180
ENSMUST00000109732 Zfp429-001 protein_coding Mus_musculus 9.00054e-42 176
ENSMUST00000181071 Zfp429-002 protein_coding Mus_musculus 9.00054e-42 176
ENSMUST00000162659 Zfp677-001 protein_coding Mus_musculus 2e-37 161
ENSMUST00000056107 Zfp677-002 protein_coding Mus_musculus 2e-37 161
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 7e-23 113
ENSMUST00000071804 AI987944-001 protein_coding Mus_musculus 9e-22 110
ENSMUST00000099449 Zfp808-001 protein_coding Mus_musculus 9e-22 110
ENSMUST00000098509 AW146154-001 protein_coding Mus_musculus 1e-20 106
ENSMUST00000101547 Zfp934-202 protein_coding Mus_musculus 5e-19 100
ENSMUST00000065871 Zfp229-201 protein_coding Mus_musculus 5e-19 100
ENSMUST00000182603 Zfp229-001 protein_coding Mus_musculus 5e-19 100
ENSMUST00000076195 Zfp935-201 protein_coding Mus_musculus 7e-18 97
ENSMUST00000082203 Zfp934-201 protein_coding Mus_musculus 0.00000000000005 84
ENSMUST00000120832 Gm15182-001 processed_pseudogene Mus_musculus 0.0000000001 73
ENSMUST00000057241 Zfp874a-003 protein_coding Mus_musculus 0.000000005 68
ENSMUST00000107989 Gm3604-201 protein_coding Mus_musculus 0.00000007 64
ENSMUST00000187656 Gm3604-001 protein_coding Mus_musculus 0.00000007 64

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