C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PDZ and LIM domain 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418373 PDLIM4-004 ENSG00000131435 9606 + 5:132261449-132271336 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverLungOvaryENST00000418373
Transcript ID Colon Liver Lung Ovary
ENST00000418373 1.119±0.00 2.525±0.00 1.040±0.00 0.887±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093D CIL_00093D_0001 VISTA 5:131965137-132566411
CIL_0007RF CIL_0007RF_0001 VISTA 5:131967147-132570227

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144477 Pdlim4-005 protein_coding Mus_musculus 0 427
ENSMUST00000093109 Pdlim4-003 protein_coding Mus_musculus 0 420
ENSMUST00000018755 Pdlim4-001 protein_coding Mus_musculus 0 420

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