C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30 pseudogene 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418873 RPL30P13-001 ENSG00000229014 9606 - 12:40068243-40068590 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartLungMuscleTestisENST00000418873
Transcript ID Adrenal Heart Lung Muscle Testis
ENST00000418873 0.037±0.00 0.033±0.00 0.132±0.00 0.032±0.00 0.067±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HV CIL_0006HV_0001 CGP 12:39626167-40106089
CIL_0006R2 CIL_0006R2_0001 CGP 12:39755021-40369285

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122265 Rpl30-ps9-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000009039 Rpl30-002 protein_coding Mus_musculus 0 366
ENSMUST00000079735 Rpl30-001 protein_coding Mus_musculus 0 366
ENSMUST00000142643 Rpl30-005 processed_transcript Mus_musculus 0 364
ENSMUST00000117119 Rpl30-ps10-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000118307 Gm12191-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000076166 Rpl30-ps8-201 processed_pseudogene Mus_musculus 0 359
ENSMUST00000071536 Gm6570-201 processed_pseudogene Mus_musculus 0 357
ENSMUST00000119767 Rpl30-ps1-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000117928 Rpl30-ps3-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000119573 Gm9703-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000140527 Rpl30-004 processed_transcript Mus_musculus 9e-39 163
ENSMUST00000135417 Rpl30-003 retained_intron Mus_musculus 9e-39 163

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