C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich transmembrane and O-methyltransferase domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419228 LRTOMT-202 ENSG00000184154 9606 + 11:72094985-72110777 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0001 VISTA 11:72069476-72670457
CIL_0002MI CIL_0002MI_0001 CGP 11:72080331-72110782

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0007605 ISS sensory perception of sound
GO:0016021 IEA integral component of membrane
GO:0016206 ISS catechol O-methyltransferase activity
GO:0032259 IEA methylation
GO:0042135 IEA neurotransmitter catabolic process
GO:0042424 ISS catecholamine catabolic process
GO:0060117 ISS auditory receptor cell development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106969 Tomt-001 protein_coding Mus_musculus 0 815
ENSMUST00000032884 Anapc15-005 retained_intron Mus_musculus 0 612
ENSMUST00000178851 Anapc15-201 protein_coding Mus_musculus 0 300
ENSMUST00000144207 Anapc15-001 protein_coding Mus_musculus 0 300
ENSMUST00000129641 Anapc15-012 processed_transcript Mus_musculus 0 254
ENSMUST00000035395 Anapc15-003 protein_coding Mus_musculus 0 254
ENSMUST00000106978 Anapc15-002 protein_coding Mus_musculus 0 254
ENSMUST00000106973 Anapc15-009 protein_coding Mus_musculus 0 230
ENSMUST00000171712 Gm9364-201 pseudogene Mus_musculus 0 222
ENSMUST00000099328 Anapc15-ps-201 protein_coding Mus_musculus 0.000000000000005 88

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