C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 1 open reading frame 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419367 C1orf27-004 ENSG00000157181 9606 + 1:186375823-186419551 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryENST00000419367
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENST00000419367 1.064±0.00 1.983±0.00 1.420±0.00 2.998±0.00 0.366±0.00 2.981±0.00 1.112±0.00 3.921±0.00 3.159±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BN CIL_0001BN_0002 CGP 1:186311652-186421378

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094477 BC003331-004 nonsense_mediated_decay Mus_musculus 0 1123
ENSMUST00000111913 BC003331-001 protein_coding Mus_musculus 0 1098
ENSMUST00000097547 BC003331-003 protein_coding Mus_musculus 0 645
ENSMUST00000148389 BC003331-005 processed_transcript Mus_musculus 0 641
ENSMUST00000097546 BC003331-201 protein_coding Mus_musculus 0 569
ENSMUST00000006167 BC003331-002 protein_coding Mus_musculus 0 569
ENSMUST00000140112 BC003331-007 retained_intron Mus_musculus 0 327
ENSMUST00000150615 BC003331-006 retained_intron Mus_musculus 0 324

Loading