C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | major histocompatibility complex, class I, U (pseudogene) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000419369  |
HLA-U-001 |
ENSG00000223352 |
9606 | + |
CHR_HSCHR6_MHC_COX_CTG1:29923817-29924002  |
unprocessed_pseudogene |
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000172782
|
H2-K1-007 | processed_transcript | Mus_musculus | 3.00004e-41 | 171 |
|
ENSMUST00000173075
|
H2-K1-010 | protein_coding | Mus_musculus | 3.00004e-41 | 171 |
|
ENSMUST00000025181
|
H2-K1-001 | protein_coding | Mus_musculus | 3.00004e-41 | 171 |
|
ENSMUST00000114311
|
H2-K1-002 | retained_intron | Mus_musculus | 3.00004e-41 | 171 |
|
ENSMUST00000172912
|
H2-K1-003 | protein_coding | Mus_musculus | 3.00004e-41 | 171 |
|
ENSMUST00000184502
|
H2-Bl-008 | protein_coding | Mus_musculus | 6e-23 | 110 |
|
ENSMUST00000185087
|
H2-Bl-005 | nonsense_mediated_decay | Mus_musculus | 6e-23 | 110 |
|
ENSMUST00000173080
|
H2-Bl-201 | protein_coding | Mus_musculus | 6e-23 | 110 |
