C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 2 open reading frame 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420306 C2orf42-002 ENSG00000115998 9606 - 2:70149898-70181995 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverMusclePlacentaTestisENST00000420306
Transcript ID Adrenal Brain Breast Colon Kidney Liver Muscle Placenta Testis
ENST00000420306 5.903±0.00 2.974±0.00 2.782±0.00 3.191±0.00 4.418±1.37 2.529±0.00 2.617±0.00 3.702±0.42 30.583±2.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089T CIL_00089T_0001 VISTA 2:69833131-70434482

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113700 C87436-002 protein_coding Mus_musculus 0 2010
ENSMUST00000050497 C87436-001 protein_coding Mus_musculus 0 2010
ENSMUST00000133753 C87436-005 nonsense_mediated_decay Mus_musculus 0 1267
ENSMUST00000141972 C87436-003 nonsense_mediated_decay Mus_musculus 0 1267
ENSMUST00000113698 C87436-004 protein_coding Mus_musculus 0 1085
ENSMUST00000148768 C87436-007 processed_transcript Mus_musculus 0 398

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