C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein phosphatase 2, regulatory subunit B, delta pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420526 PPP2R2DP1-001 ENSG00000231668 9606 + 3:38051759-38052395 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartOvaryTestisENST00000420526
Transcript ID Adrenal Heart Ovary Testis
ENST00000420526 0.019±0.00 0.017±0.00 0.098±0.00 0.042±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CZ CIL_0008CZ_0001 VISTA 3:37464508-38067589
CIL_00099X CIL_00099X_0001 VISTA 3:37469210-38073013
CIL_0005VD CIL_0005VD_0001 CGP 3:38007496-38124025
CIL_0005W9 CIL_0005W9_0001 CGP 3:38039205-38137242

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172764 Ppp2r2d-009 nonsense_mediated_decay Mus_musculus 0 388
ENSMUST00000174090 Ppp2r2d-008 protein_coding Mus_musculus 0 202
ENSMUST00000155672 Ppp2r2d-003 protein_coding Mus_musculus 0 202
ENSMUST00000041097 Ppp2r2d-001 protein_coding Mus_musculus 0 202

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