C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 17 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420566 KRT17P3-001 ENSG00000231870 9606 - 17:30567700-30571748 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastLungOvaryTestisENST00000420566
Transcript ID Adipose Brain Breast Lung Ovary Testis
ENST00000420566 0.037±0.00 0.025±0.00 0.047±0.00 0.181±0.00 0.167±0.00 0.120±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 1487
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 1109
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 933
ENSMUST00000017270 Krt42-001 protein_coding Mus_musculus 0 819
ENSMUST00000007280 Krt16-001 protein_coding Mus_musculus 0 667
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 556
ENSMUST00000121423 Gm11597-001 unprocessed_pseudogene Mus_musculus 0 505
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0 501
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 0 488
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 405
ENSMUST00000107406 Krt42-002 retained_intron Mus_musculus 0 403
ENSMUST00000038004 Krt25-001 protein_coding Mus_musculus 4e-33 147
ENSMUST00000100482 Krt26-001 protein_coding Mus_musculus 2e-25 121
ENSMUST00000148770 Krt26-002 processed_transcript Mus_musculus 8e-20 102

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