C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L37a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420712 RPL37A-006 ENSG00000197756 9606 + 2:216498862-216501462 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000420712
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000420712 1039.010±0.00 1419.490±0.00 232.604±0.00 1207.690±0.00 1220.660±0.00 109.158±0.00 232.307±0.00 114.853±0.00 334.727±0.00 407.924±0.00 1255.576±618.67 277.604±0.00 891.578±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MF CIL_0005MF_0001 CGP 2:216498189-216664436

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099371 Gm4149-201 pseudogene Mus_musculus 0 211
ENSMUST00000059980 Rpl37a-201 protein_coding Mus_musculus 0 211
ENSMUST00000165488 Gm4613-201 processed_pseudogene Mus_musculus 0 193
ENSMUST00000117690 Gm14173-001 processed_pseudogene Mus_musculus 0 187
ENSMUST00000122133 Gm14251-001 processed_pseudogene Mus_musculus 5.99994e-41 171
ENSMUST00000118443 Gm11285-001 unprocessed_pseudogene Mus_musculus 2e-40 169
ENSMUST00000120162 Gm13875-001 processed_pseudogene Mus_musculus 3e-39 165
ENSMUST00000080671 RP24-511K23.2-001 processed_pseudogene Mus_musculus 6e-36 154
ENSMUST00000119187 Gm16106-001 processed_pseudogene Mus_musculus 1e-33 147
ENSMUST00000118308 Gm13879-001 processed_pseudogene Mus_musculus 1e-32 143

Loading