C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421095 DHX16-001 ENSG00000226171 9606 - CHR_HSCHR6_MHC_SSTO_CTG1:30645335-30665285 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003724 TAS RNA helicase activity
GO:0004386 IEA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006200 IEA ATP catabolic process
GO:0006397 IEA mRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008380 IEA RNA splicing
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025292 Dhx16-001 protein_coding Mus_musculus 0 3746
ENSMUST00000174366 Dhx16-002 nonsense_mediated_decay Mus_musculus 0 3598
ENSMUST00000172730 Dhx16-003 retained_intron Mus_musculus 0 872
ENSMUST00000173596 Dhx16-007 retained_intron Mus_musculus 0 556
ENSMUST00000174308 Dhx16-006 retained_intron Mus_musculus 0 392
ENSMUST00000174330 Dhx16-005 retained_intron Mus_musculus 0 326
ENSMUST00000173967 Dhx16-008 protein_coding Mus_musculus 0 309
ENSMUST00000174449 Dhx16-004 retained_intron Mus_musculus 0 261

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