C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 2, group F, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421109 NR2F2-002 ENSG00000185551 9606 + 15:96325938-96338618 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000421109
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000421109 21.112±0.00 35.457±0.00 1.631±0.48 10.111±2.14 13.320±9.64 0.401±0.00 15.073±11.59 3.890±1.25 3.269±0.00 0.796±0.00 27.871±21.14 22.616±9.30 28.806±18.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007O7 CIL_0007O7_0001 UCNEbase 15:94530989-96398057
CIL_000932 CIL_000932_0001 VISTA 15:96284824-96887064

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001937 IMP negative regulation of endothelial cell proliferation
GO:0001972 IDA retinoic acid binding
GO:0003700 IC:IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0003714 TAS transcription corepressor activity
GO:0004879 IEA:IDA ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006629 TAS lipid metabolic process
GO:0007165 TAS signal transduction
GO:0008270 IEA zinc ion binding
GO:0010596 IMP negative regulation of endothelial cell migration
GO:0030522 IEA intracellular receptor signaling pathway
GO:0042803 IPI protein homodimerization activity
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IDA sequence-specific DNA binding
GO:0045736 IDA negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0060849 IMP regulation of transcription involved in lymphatic endothelial cell fate commitment

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032768 Nr2f2-001 protein_coding Mus_musculus 0 2451
ENSMUST00000089565 Nr2f2-002 protein_coding Mus_musculus 0 2098
ENSDART00000059976 nr2f2-201 protein_coding Danio_rerio 0 647
ENSDART00000130163 nr2f2-001 protein_coding Danio_rerio 0 647

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