C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATR interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421175 ATRIP-007 ENSG00000164053 9606 + 3:48446710-48459397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLungOvaryENST00000421175
Transcript ID Brain Breast Colon Lung Ovary
ENST00000421175 0.526±0.00 0.569±0.00 0.597±0.00 0.214±0.00 0.739±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U6 CIL_0007U6_0001 VISTA 3:47843366-48458182
CIL_0002UL CIL_0002UL_0001 CGP 3:48446710-48467645

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160928 Atrip-002 nonsense_mediated_decay Mus_musculus 0 580
ENSMUST00000161521 Atrip-004 protein_coding Mus_musculus 0 579
ENSMUST00000045011 Atrip-001 protein_coding Mus_musculus 0 579
ENSMUST00000160217 Atrip-003 nonsense_mediated_decay Mus_musculus 0 579

Loading