C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: outer dense fiber of sperm tails 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421776 ODF2-020 ENSG00000136811 9606 + 9:128456450-128485404 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLiverENST00000421776
Transcript ID Bladder Brain Colon Liver
ENST00000421776 0.580±0.00 1.241±0.00 0.818±0.00 2.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E9 CIL_0007E9_0001 CGP 9:128411751-128501292
CIL_0007EC CIL_0007EC_0001 CGP 9:128455186-128542288

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113764 Odf2-012 protein_coding Mus_musculus 0 1212
ENSMUST00000113765 Odf2-006 protein_coding Mus_musculus 0 1212
ENSMUST00000113762 Odf2-011 protein_coding Mus_musculus 0 1212
ENSMUST00000028128 Odf2-009 protein_coding Mus_musculus 0 1212
ENSMUST00000046571 Odf2-001 protein_coding Mus_musculus 0 1212
ENSMUST00000113755 Odf2-008 protein_coding Mus_musculus 0 1212
ENSMUST00000184845 Odf2-005 nonsense_mediated_decay Mus_musculus 0 1212
ENSMUST00000113756 Odf2-002 protein_coding Mus_musculus 0 1212
ENSMUST00000113757 Odf2-004 protein_coding Mus_musculus 0 1212
ENSMUST00000113763 Odf2-010 protein_coding Mus_musculus 0 1212
ENSMUST00000113767 Odf2-007 protein_coding Mus_musculus 0 1212
ENSMUST00000113759 Odf2-003 protein_coding Mus_musculus 0 1197
ENSMUST00000152932 Odf2-022 processed_transcript Mus_musculus 0 824
ENSMUST00000129960 Odf2-023 processed_transcript Mus_musculus 0 710
ENSMUST00000137558 Odf2-018 protein_coding Mus_musculus 0 536
ENSMUST00000131165 Odf2-024 retained_intron Mus_musculus 0 464
ENSMUST00000152503 Odf2-013 retained_intron Mus_musculus 0 459
ENSMUST00000126103 Odf2-019 processed_transcript Mus_musculus 0 355
ENSMUST00000130899 Odf2-021 processed_transcript Mus_musculus 0 255
ENSMUST00000153216 Odf2-017 retained_intron Mus_musculus 8e-35 152
ENSMUST00000133233 Odf2-016 protein_coding Mus_musculus 8e-35 152
ENSMUST00000123335 Odf2-014 protein_coding Mus_musculus 3e-34 150
ENSMUST00000148883 Odf2-015 retained_intron Mus_musculus 1e-33 148

Loading