C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ets variant 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421809 ETV5-007 ENSG00000244405 9606 - 3:186080047-186108999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000421809
Transcript ID Colon
ENST00000421809 2.359±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZT CIL_0008ZT_0001 VISTA 3:185444884-186046681
CIL_0006RI CIL_0006RI_0001 CGP 3:185915906-186110318
CIL_0006RL CIL_0006RL_0001 CGP 3:186046308-186362237

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079601 Etv5-001 protein_coding Mus_musculus 0 664
ENSMUST00000170393 Etv5-003 protein_coding Mus_musculus 0 460
ENSMUST00000168774 Etv5-002 protein_coding Mus_musculus 0 351
ENSMUST00000165506 Etv5-004 processed_transcript Mus_musculus 6e-28 128

Loading