C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCCTC-binding factor (zinc finger protein)-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422109 CTCFL-018 ENSG00000124092 9606 - 20:57499554-57524867 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HJ CIL_0008HJ_0001 VISTA 20:57109440-57710361
CIL_0008BA CIL_0008BA_0001 VISTA 20:57139654-57744237
CIL_00030G CIL_00030G_0001 CGP 20:57391407-57525652
CIL_0005JC CIL_0005JC_0001 CGP 20:57495966-57568112

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006349 ISS regulation of gene expression by genetic imprinting
GO:0006351 IEA transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0010628 IDA positive regulation of gene expression
GO:0016571 ISS histone methylation
GO:0042393 ISS histone binding
GO:0043046 ISS DNA methylation involved in gamete generation
GO:0043565 ISS sequence-specific DNA binding
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0051569 IMP regulation of histone H3-K4 methylation

Homologs

No Homologs available.

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