C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422398 SLC1A1-002 ENSG00000106688 9606 + 9:4572335-4585557 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000422398
Transcript ID Muscle Testis
ENST00000422398 0.460±0.00 0.451±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NI CIL_0000NI_0001 CGP 9:3824127-4587469
CIL_0000NJ CIL_0000NJ_0001 CGP 9:4490444-4666674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006835 IEA dicarboxylic acid transport
GO:0016020 IEA membrane
GO:0017153 IEA sodium:dicarboxylate symporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161119 Slc1a1-002 retained_intron Mus_musculus 0 555
ENSMUST00000162189 Slc1a1-004 retained_intron Mus_musculus 0 553
ENSMUST00000160702 Slc1a1-003 retained_intron Mus_musculus 0 553
ENSMUST00000025875 Slc1a1-001 protein_coding Mus_musculus 0 553
ENSMUST00000179171 4430402I18Rik-201 protein_coding Mus_musculus 0 547

Loading