C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sec23 homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422877 SEC23B-008 ENSG00000101310 9606 + 20:18542368-18560833 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000422877
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000422877 6.335±0.00 10.590±0.00 19.086±0.00 10.442±0.00 5.701±0.00 36.002±0.00 10.018±0.00 17.258±0.00 0.638±0.00 9.637±0.00 6.919±0.00 25.791±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MU CIL_0002MU_0001 CGP 20:18486540-18561415
CIL_0000YA CIL_0000YA_0001 CGP 20:18507493-18569563

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006886 IEA intracellular protein transport
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0030127 IEA COPII vesicle coat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000128210 Sec23b-003 processed_transcript Mus_musculus 0 560
ENSMUST00000028916 Sec23b-001 protein_coding Mus_musculus 0 560

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