C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424043 GAPDHP46-001 ENSG00000224678 9606 - 1:92114803-92115796 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartMuscleENST00000424043
Transcript ID Adipose Brain Breast Colon Heart Muscle
ENST00000424043 0.047±0.00 0.089±0.00 0.137±0.00 0.146±0.00 0.029±0.00 0.082±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YV CIL_0008YV_0001 VISTA 1:91545179-92146674
CIL_0005ZT CIL_0005ZT_0001 CGP 1:92080305-92184723

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 876
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 876
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 876
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 876
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 876
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 876
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 867
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 859
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 856
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 856
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 848
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 848
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 848
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 848
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 837
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 837
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 835
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 833
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 826
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 813
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 811
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 808
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 808
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 804
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 804
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 802
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 800
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 798
ENSMUST00000182266 Gm2467-001 processed_pseudogene Mus_musculus 0 798
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 797
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 793
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 793
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 791
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000182661 Gm7251-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 785
ENSMUST00000182524 Gm2076-001 processed_pseudogene Mus_musculus 0 784
ENSMUST00000182456 Gm16470-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 778
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 776
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 771
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 767
ENSMUST00000121506 Gm5270-001 processed_pseudogene Mus_musculus 0 761
ENSMUST00000182021 Gm4929-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 752
ENSMUST00000082064 Gm6316-001 processed_pseudogene Mus_musculus 0 750
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 750
ENSMUST00000117318 Gm11453-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000180415 Gm5523-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000133495 3000002C10Rik-001 transcribed_processed_pseudogene Mus_musculus 0 737
ENSMUST00000125451 3000002C10Rik-003 processed_transcript Mus_musculus 0 737
ENSMUST00000144161 3000002C10Rik-002 processed_transcript Mus_musculus 0 737
ENSMUST00000182369 Gm6283-001 processed_pseudogene Mus_musculus 0 736
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000182691 Gm7286-001 processed_pseudogene Mus_musculus 0 730
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000181413 Gm6498-002 transcribed_processed_pseudogene Mus_musculus 0 725
ENSMUST00000182525 Gm5430-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000118148 Gm13592-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000122453 Gm12017-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000182596 Gm5732-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000182599 Gm6967-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000182514 Gm9568-001 processed_pseudogene Mus_musculus 0 699
ENSMUST00000118789 Gm6322-001 processed_pseudogene Mus_musculus 0 699
ENSMUST00000190835 RP24-347J6.3-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000182707 Gm9061-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000183076 Gm5345-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000182995 Gm5335-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000183259 Gm8565-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000182020 Gm7481-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000182724 Gm9149-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000182847 Gm4812-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000118730 Gm13326-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000122085 Gm15593-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000183288 Gm7833-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000081029 Gm6498-001 processed_transcript Mus_musculus 0 654
ENSMUST00000120199 Gm12969-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000182201 Gm5300-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000182375 Gm8492-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000182705 Gm8343-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000118700 Gm9164-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000122262 Gm6298-001 processed_pseudogene Mus_musculus 0 640
ENSMUST00000118643 Gm14921-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000122068 Gm11960-001 transcribed_processed_pseudogene Mus_musculus 0 628
ENSMUST00000181063 Gm11960-002 processed_transcript Mus_musculus 0 628
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 627
ENSMUST00000182279 Gm4891-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000182254 Gm9146-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000182237 Gm6946-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000184810 Gm11214-001 translated_processed_pseudogene Mus_musculus 0 625
ENSMUST00000182329 Gm7611-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000182555 Gm8048-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000188558 RP23-337B16.2-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000182235 Gm7745-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000183159 Gm6317-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000182716 Gm6771-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000183137 Gm6931-001 transcribed_processed_pseudogene Mus_musculus 0 612
ENSMUST00000181990 Gm4823-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000153034 Gm10364-001 transcribed_processed_pseudogene Mus_musculus 0 606
ENSMUST00000076633 Gm10364-002 processed_transcript Mus_musculus 0 606
ENSMUST00000181445 Gm7741-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000117854 Gm13296-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000118792 Gm18859-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000117214 Gm13870-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000182434 Gm8245-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000183230 Gm8709-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000183092 Gm5177-001 transcribed_processed_pseudogene Mus_musculus 0 592
ENSMUST00000183337 Gm5177-002 processed_transcript Mus_musculus 0 592
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000182857 Gm18822-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000182220 Gm7763-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000183205 Gm7627-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000181525 Gm5706-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000184486 Gm12117-001 translated_processed_pseudogene Mus_musculus 0 558
ENSMUST00000183151 Gm26977-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000181982 Gm5342-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000182374 Gm7719-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000183173 Gm9423-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000182945 Gm8955-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000119771 Gm11198-001 processed_pseudogene Mus_musculus 0 523
ENSMUST00000183005 Gm8984-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000119554 Gm9439-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000181115 Gm8357-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000183298 Gm8529-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000182285 Gm9381-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000182882 Gm9211-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000182302 Gm7132-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000182391 Gm26913-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000181607 Gm5974-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000117926 Gm13527-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000182096 Gm8601-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000183067 Gm9358-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000144205 Gapdh-005 processed_transcript Mus_musculus 0 422
ENSMUST00000182543 Gm7577-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000184252 Gm11214-002 protein_coding Mus_musculus 0 409
ENSMUST00000121399 Gm14113-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000185454 RP24-255L24.1-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000182417 Gm5354-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000118983 Gm11447-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000118918 Gm11907-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000182466 Gm17800-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000182929 Gm26976-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000182616 Gm7572-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000190817 RP24-369P14.1-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000118893 Gm15957-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000120406 Gm15554-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000183831 Gm12117-002 protein_coding Mus_musculus 0 268
ENSMUST00000182079 Gm15294-002 protein_coding Mus_musculus 0 261
ENSMUST00000182372 Gm27023-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000183172 Gm26963-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000181461 Gm2383-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000182052 Gapdh-011 protein_coding Mus_musculus 0 226
ENSMUST00000118210 Gm11550-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000182115 Gapdh-016 processed_transcript Mus_musculus 0 211
ENSMUST00000183103 Gm6931-002 processed_transcript Mus_musculus 0 195
ENSMUST00000182807 Gm27043-001 processed_pseudogene Mus_musculus 1e-37 161
ENSMUST00000182277 Gapdh-010 protein_coding Mus_musculus 3e-28 130
ENSMUST00000121234 Gm13489-001 processed_pseudogene Mus_musculus 1e-26 124
ENSMUST00000182416 Gm3890-001 processed_pseudogene Mus_musculus 2e-25 121

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