C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine-rich repeat LGI family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424267 LGI3-002 ENSG00000168481 9606 - 8:22146830-22156751 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyOvaryPlacentaTestisENST00000424267
Transcript ID Adipose Bladder Brain Colon Heart Kidney Ovary Placenta Testis
ENST00000424267 0.042±0.00 0.025±0.00 15.777±0.00 0.355±0.00 0.095±0.00 0.412±0.00 0.314±0.09 0.048±0.00 0.796±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000810 CIL_000810_0001 VISTA 8:21687877-22288944
CIL_0008ZI CIL_0008ZI_0001 VISTA 8:21743578-22344815
CIL_000812 CIL_000812_0001 VISTA 8:21749915-22350771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0006887 IEA exocytosis
GO:0008152 IEA metabolic process
GO:0030054 IEA cell junction
GO:0043005 IEA neuron projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047331 Lgi3-201 protein_coding Mus_musculus 0 1629

Loading