C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424325 RPL10-201 ENSG00000147403 9606 + X:154398230-154402339 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003735 IEA:NAS structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005783 IDA endoplasmic reticulum
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0006412 IEA:NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 904
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 869
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 867
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 848
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 841
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 813
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 798
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 795
ENSMUST00000081908 Rpl10l-001 protein_coding Mus_musculus 0 708
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 0 671
ENSMUST00000121511 Gm14460-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 0 614
ENSMUST00000125775 Rpl10-005 retained_intron Mus_musculus 0 542
ENSMUST00000149171 Rpl10-004 processed_transcript Mus_musculus 0 520
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 0 435
ENSMUST00000121144 Gm11450-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000138954 Rpl10-006 retained_intron Mus_musculus 0 300
ENSMUST00000117120 Rpl10-ps4-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000146584 Rpl10-010 retained_intron Mus_musculus 0 278

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