C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: laminin, alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424408 LAMA4-012 ENSG00000112769 9606 - 6:112109293-112254538 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000424408
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000424408 23.365±0.00 6.526±0.00 1.659±0.00 29.520±0.00 6.259±2.74 3.826±0.00 1.477±0.00 0.154±0.00 8.987±0.00 3.402±0.00 7.919±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004713 IEA protein tyrosine kinase activity
GO:0004871 IEA signal transducer activity
GO:0005102 IEA receptor binding
GO:0005515 IEA protein binding
GO:0005606 IEA laminin-1 complex
GO:0005925 IEA focal adhesion
GO:0006468 IEA protein phosphorylation
GO:0007155 IEA cell adhesion
GO:0007172 IEA signal complex assembly
GO:0030155 IEA regulation of cell adhesion
GO:0030334 IEA regulation of cell migration
GO:0045995 IEA regulation of embryonic development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019992 Lama4-001 protein_coding Mus_musculus 0 5794
ENSMUST00000159580 Lama4-005 retained_intron Mus_musculus 0 1712
ENSMUST00000162211 Lama4-004 retained_intron Mus_musculus 0 1461
ENSMUST00000161303 Lama4-003 retained_intron Mus_musculus 0 1210
ENSMUST00000163036 Lama4-007 retained_intron Mus_musculus 0 340
ENSMUST00000161992 Lama4-006 retained_intron Mus_musculus 1.99993e-41 176

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