| Transcript ID | Heart | Kidney |
|---|---|---|
| ENST00000424833 | 0.066±0.05 | 0.289±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | sodium channel, voltage-gated, type II, alpha subunit | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000424833  |
SCN2A-003 |
ENSG00000136531 |
9606 | + |
2:165239402-165315598  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006CO | CIL_0006CO_0001 | CGP | 2:165087522-165392308 |
| CIL_0006CJ | CIL_0006CJ_0001 | CGP | 2:165239402-165689407 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001518 | IEA | voltage-gated sodium channel complex |
| GO:0005216 | IEA | ion channel activity |
| GO:0006811 | IEA | ion transport |
| GO:0016020 | IEA | membrane |
| GO:0034765 | IEA | regulation of ion transmembrane transport |
| GO:0035725 | IEA | sodium ion transmembrane transport |
| GO:0055085 | IEA | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000028377
|
Scn2a1-001 | protein_coding | Mus_musculus | 0 | 2183 |
|
ENSMUST00000100067
|
Scn2a1-201 | protein_coding | Mus_musculus | 0 | 2093 |
|
ENSMUST00000100069
|
Scn3a-001 | protein_coding | Mus_musculus | 0 | 1312 |
|
ENSMUST00000066432
|
Scn3a-201 | protein_coding | Mus_musculus | 0 | 1306 |
|
ENSMUST00000112366
|
Scn1a-001 | protein_coding | Mus_musculus | 0 | 1297 |
|
ENSMUST00000112371
|
Scn1a-201 | protein_coding | Mus_musculus | 0 | 1293 |
|
ENSMUST00000077489
|
Scn1a-004 | protein_coding | Mus_musculus | 0 | 1286 |
|
ENSMUST00000094951
|
Scn1a-005 | protein_coding | Mus_musculus | 0 | 1271 |
|
ENSMUST00000169900
|
Scn9a-203 | protein_coding | Mus_musculus | 0 | 643 |
|
ENSMUST00000144254
|
Scn2a1-002 | protein_coding | Mus_musculus | 0 | 640 |
|
ENSMUST00000138910
|
Scn1a-006 | protein_coding | Mus_musculus | 0 | 536 |
|
ENSMUST00000108910
|
Scn8a-205 | protein_coding | Mus_musculus | 0 | 451 |
|
ENSDART00000022042
|
scn8aa-001 | protein_coding | Danio_rerio | 0 | 435 |
|
ENSMUST00000108908
|
Scn8a-203 | protein_coding | Mus_musculus | 0 | 422 |
|
ENSMUST00000108909
|
Scn8a-204 | protein_coding | Mus_musculus | 0 | 422 |
|
ENSMUST00000138368
|
Scn2a1-003 | processed_transcript | Mus_musculus | 0 | 366 |
|
ENSMUST00000129508
|
Scn1a-002 | processed_transcript | Mus_musculus | 0 | 309 |
|
ENSDART00000097722
|
SCN11A-201 | protein_coding | Danio_rerio | 0 | 250 |
