C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDK5 regulatory subunit associated protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425647 CDK5RAP2-013 ENSG00000136861 9606 - 9:120389201-120448072 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLungMuscleOvaryPlacentaTestisENST00000425647
Transcript ID Adipose Adrenal Breast Colon Lung Muscle Ovary Placenta Testis
ENST00000425647 2.842±0.00 4.779±0.00 6.308±0.00 4.349±0.00 1.526±0.00 12.859±0.00 7.496±1.71 1.617±0.44 7.145±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FK CIL_0004FK_0001 CGP 9:119153458-120580170
CIL_0004FL CIL_0004FL_0001 CGP 9:120388869-120714470

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005813 IDA centrosome
GO:0030054 IDA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076541 Cdk5rap2-003 nonsense_mediated_decay Mus_musculus 0 1266
ENSMUST00000144099 Cdk5rap2-001 protein_coding Mus_musculus 0 1266
ENSMUST00000138561 Cdk5rap2-006 protein_coding Mus_musculus 0 464
ENSMUST00000140108 Cdk5rap2-002 protein_coding Mus_musculus 0 209

Loading