C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426371 HNRNPA1P40-001 ENSG00000212961 9606 + 11:74354443-74355720 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000426371
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000426371 0.112±0.00 0.269±0.00 0.044±0.01 0.125±0.02 0.125±0.02 0.043±0.00 0.024±0.00 0.026±0.00 0.034±0.00 0.094±0.00 0.073±0.05 0.017±0.00 0.103±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1055
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1055
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1031
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1005
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 989
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 966
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 933
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 933
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 911
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 824
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 767
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 665
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 4e-33 147

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