C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDGFA associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000426447 PDAP1-002 ENSG00000106244 9606 - 7:99396523-99408590 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverOvaryPlacentaTestisENST00000426447
Transcript ID Kidney Liver Ovary Placenta Testis
ENST00000426447 10.132±0.00 10.643±0.00 212.331±0.00 89.114±0.00 46.976±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005L5 CIL_0005L5_0002 CGP 7:99325898-99394801
CIL_0004TJ CIL_0004TJ_0001 CGP 7:99374249-99408829
CIL_0005LD CIL_0005LD_0002 CGP 7:99392048-99419616

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031627 Pdap1-001 protein_coding Mus_musculus 0 885
ENSMUST00000123111 Pdap1-002 processed_transcript Mus_musculus 0 761
ENSMUST00000143439 Pdap1-004 retained_intron Mus_musculus 0 512

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