C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | stromal antigen 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000426455  |
STAG3-004 |
ENSG00000066923 |
9606 | + |
7:100177563-100214380  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008QI | CIL_0008QI_0001 | VISTA | 7:99696610-100298804 |
| CIL_0005CH | CIL_0005CH_0001 | CGP | 7:100169606-100221488 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000775 | IEA | chromosome, centromeric region |
| GO:0000795 | TAS | synaptonemal complex |
| GO:0005488 | IEA | binding |
| GO:0005615 | IDA | extracellular space |
| GO:0005634 | IDA | nucleus |
| GO:0005730 | IDA | nucleolus |
| GO:0007059 | IEA | chromosome segregation |
| GO:0007130 | TAS | synaptonemal complex assembly |
| GO:0030893 | IDA | meiotic cohesin complex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000162245
|
Stag3-004 | protein_coding | Mus_musculus | 0 | 3038 |
|
ENSMUST00000048028
|
Stag3-001 | protein_coding | Mus_musculus | 0 | 3038 |
|
ENSMUST00000161113
|
Stag3-002 | retained_intron | Mus_musculus | 0 | 1941 |
|
ENSMUST00000159483
|
Stag3-003 | retained_intron | Mus_musculus | 0 | 1262 |
|
ENSMUST00000161615
|
Stag3-007 | processed_transcript | Mus_musculus | 0 | 468 |
|
ENSDART00000088094
|
stag2b-201 | protein_coding | Danio_rerio | 0 | 255 |
