C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ferritin, light polypeptide pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427242 FTLP3-001 ENSG00000226608 9606 + 20:4023917-4024444 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000427242
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000427242 4.812±0.00 2.757±0.00 0.127±0.00 1.060±0.00 4.458±0.00 2.490±0.00 0.503±0.00 3.194±0.00 6.262±0.00 8.509±0.00 1.295±0.00 0.881±0.60 0.805±0.38 0.591±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068E CIL_00068E_0002 CGP 20:3927309-4187747

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118517 Ftl2-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000169477 Gm20746-201 processed_pseudogene Mus_musculus 0 466
ENSMUST00000090860 Gm10116-201 protein_coding Mus_musculus 0 460
ENSMUST00000094434 Ftl1-001 protein_coding Mus_musculus 0 457
ENSMUST00000078419 Gm15590-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000121695 Gm12164-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000135869 Ftl1-002 nonsense_mediated_decay Mus_musculus 0 377
ENSMUST00000176468 Gm6407-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000119072 Gm8814-001 processed_pseudogene Mus_musculus 0 272

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