C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427776 RP11-458F8.3-001 ENSG00000179131 9606 + 7:66914581-66914943 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastMuscleOvaryTestisENST00000427776
Transcript ID Adrenal Brain Breast Muscle Ovary Testis
ENST00000427776 0.215±0.00 0.089±0.00 0.576±0.53 0.113±0.00 0.849±0.00 0.060±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000256 CIL_000256_0001 CGP 7:66682164-66958551

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086596 Rpl31-ps9-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000181935 Rpl31-ps8-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000179954 Rpl31-203 protein_coding Mus_musculus 0 357
ENSMUST00000178079 Rpl31-202 protein_coding Mus_musculus 0 357
ENSMUST00000086535 Rpl31-201 protein_coding Mus_musculus 0 357
ENSMUST00000119898 Rpl31-ps11-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000119957 Rpl31-ps12-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000143596 Rpl31-ps14-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000080982 Rpl31-ps20-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000181130 Rpl31-ps16-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000180885 Rpl31-ps18-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000097040 Rpl31-ps17-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000085128 Rpl31-ps1-201 processed_pseudogene Mus_musculus 0 313
ENSMUST00000079114 Rpl31-ps4-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000181857 Rpl31-ps15-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000180629 Rpl31-ps7-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000117961 Rpl31-ps22-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000181182 Rpl31-ps21-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000180929 Rp31-ps19-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000118086 Rpl31-ps5-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000181350 Rpl31-ps24-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000191562 RP24-82I5.2-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000181557 Rpl31-ps25-001 processed_pseudogene Mus_musculus 0 211

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