C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428087 RP11-248I9.2-001 ENSG00000233940 9606 + 1:35053468-35059271 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000428087
Transcript ID Testis
ENST00000428087 0.140±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 0 207
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 0 207
ENSMUST00000168697 Gm10275-001 transcribed_processed_pseudogene Mus_musculus 0 204
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 0 198
ENSMUST00000116168 Rpl12-ps1-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000119608 Gm11425-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 2.8026e-45 185
ENSMUST00000121857 Gm15793-001 processed_pseudogene Mus_musculus 1.99965e-42 176
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 8e-36 154
ENSMUST00000071515 Gm7117-001 processed_pseudogene Mus_musculus 1e-34 150
ENSMUST00000172474 Gm20430-001 processed_pseudogene Mus_musculus 8e-26 121
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 8e-21 104
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 1e-19 100
ENSMUST00000117322 Gm12038-001 processed_pseudogene Mus_musculus 4e-19 99
ENSMUST00000121669 Gm11745-001 processed_pseudogene Mus_musculus 0.0000000000005 79

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