C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alkB, alkylation repair homolog 8 (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428149 ALKBH8-001 ENSG00000137760 9606 - 11:107502726-107565746 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000428149
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000428149 0.124±0.00 0.530±0.00 0.482±0.18 0.585±0.00 0.488±0.20 0.568±0.00 0.632±0.00 0.823±0.22 0.757±0.31 0.687±0.37 1.164±0.55

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0008152 IEA metabolic process
GO:0008168 IEA methyltransferase activity
GO:0016300 IDA tRNA (uracil) methyltransferase activity
GO:0016491 IEA oxidoreductase activity
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0030488 IDA tRNA methylation
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165105 Alkbh8-202 protein_coding Mus_musculus 0 1659
ENSMUST00000053407 Alkbh8-201 protein_coding Mus_musculus 0 1659

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