C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: surfactant protein B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428225 SFTPB-002 ENSG00000168878 9606 - 2:85658255-85668172 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000428225
Transcript ID Lung
ENST00000428225 533.996±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WR CIL_0007WR_0001 VISTA 2:85469895-86073896
CIL_00084P CIL_00084P_0001 VISTA 2:85470344-86073882

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006629 IEA lipid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183278 Sftpb-002 nonsense_mediated_decay Mus_musculus 0 649
ENSMUST00000182014 Sftpb-001 nonsense_mediated_decay Mus_musculus 0 649
ENSMUST00000070437 Sftpb-201 protein_coding Mus_musculus 0 640
ENSMUST00000000608 Gm2a-001 protein_coding Mus_musculus 0.000009 57

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