C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428495 RP4-644L1.2-001 ENSG00000229771 9606 - 20:40696499-40698616 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungOvaryTestisENST00000428495
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Ovary Testis
ENST00000428495 0.008±0.00 0.016±0.00 0.046±0.00 0.028±0.00 0.046±0.00 0.034±0.00 0.083±0.00 0.048±0.03 0.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LF CIL_0007LF_0001 UCNEbase 20:40234585-40834081
CIL_0007U5 CIL_0007U5_0001 VISTA 20:40240230-40840904
CIL_0007RT CIL_0007RT_0001 VISTA 20:40307139-40908986
CIL_0007XC CIL_0007XC_0001 VISTA 20:40405542-41006419
CIL_0008NB CIL_0008NB_0001 VISTA 20:40418624-41019573
CIL_0009AS CIL_0009AS_0001 VISTA 20:40438600-41039972
CIL_0009AT CIL_0009AT_0001 VISTA 20:40443816-41046384
CIL_0008TO CIL_0008TO_0001 VISTA 20:40476967-41078466
CIL_0009AU CIL_0009AU_0001 VISTA 20:40532909-41134985
CIL_0007XA CIL_0007XA_0001 VISTA 20:40544008-41145062
CIL_0008MI CIL_0008MI_0001 VISTA 20:40554707-41155953
CIL_0008QO CIL_0008QO_0001 VISTA 20:40556740-41158918
CIL_0009AV CIL_0009AV_0001 VISTA 20:40645674-41248255

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

No Homologs available.

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