C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: histone deacetylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428704 HDAC1-010 ENSG00000116478 9606 + 1:32292140-32329140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainLungENST00000428704
Transcript ID Adipose Brain Lung
ENST00000428704 8.211±0.00 7.752±0.00 6.725±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0001 VISTA 1:31744429-32345312

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004407 IEA histone deacetylase activity
GO:0016575 IEA histone deacetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079363 Gm10093-201 protein_coding Mus_musculus 0 516
ENSMUST00000102597 Hdac1-001 protein_coding Mus_musculus 0 505
ENSMUST00000139305 Hdac1-002 retained_intron Mus_musculus 0 451
ENSMUST00000142984 Hdac1-005 retained_intron Mus_musculus 0 292
ENSMUST00000132909 Hdac1-006 retained_intron Mus_musculus 0 220
ENSMUST00000150105 Hdac1-004 retained_intron Mus_musculus 0 220
ENSMUST00000125718 Hdac1-003 retained_intron Mus_musculus 0 220

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