C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L23a pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428990 RPL23AP1-001 ENSG00000239257 9606 - 6:29726669-29727139 transcribed_processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMuscleENST00000428990
Transcript ID Kidney Muscle
ENST00000428990 3.452±0.00 2.097±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000420 CIL_000420_0003 CGP 6:29722775-29831125

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120313 Gm5384-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000085589 Gm6177-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000119619 Gm7219-001 processed_pseudogene Mus_musculus 4.06377e-44 182
ENSMUST00000117846 Gm11673-001 processed_pseudogene Mus_musculus 4e-29 132

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